BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A07SP1|AL425964
(741 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1653 1464 0.0
>3x_Contig1653
Length = 14012
Score = 1464 bits (737), Expect = 0.0
Identities = 738/739 (99%)
Strand = Plus / Plus
Query: 3 gcaccaccattactggcaccgtcagattcggcctccggttgagcctgtccctcactcttc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5242 gcaccaccattactggcaccgtcagattcggcctccggttgagcctgtccctcactcttc 5301
Query: 63 gcatcaaccggttttgtatcaaaaatacctgtttcatgcgcttccttaaggtcacgtgtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5302 gcatcaaccggttttgtatcaaaaatacctgtttcatgcgcttccttaaggtcacgtgtc 5361
Query: 123 tcagccatctgcattgcttttattacgtatttcaagtatttgctttctgaaaactttaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5362 tcagccatctgcattgcttttattacgtatttcaagtatttgctttctgaaaactttaaa 5421
Query: 183 agtcacgtggatacttcgtgtcacctggtcagccagcccagtcaatcagtcagttaagtc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5422 agtcacgtggatacttcgtgtcacctggtcagccagcccagtcaatcagtcagttaagtc 5481
Query: 243 agttggttactgcggtatatctaaaaaccgagaaataaaaaaaaagcaaaagtcgccaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5482 agttggttactgcggtatatctaaaaaccgagaaataaaaaaaaagcaaaagtcgccaga 5541
Query: 303 gaaaaacccaaacagaacagcgaaatattcttctaacgctgtgaaataatgggaggatgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5542 gaaaaacccaaacagaacagcgaaatattcttctaacgctgtgaaataatgggaggatgt 5601
Query: 363 cccaaaagggtaacaaacaagagccattgacgaaaaaggcccaaaactttttttcaggac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5602 cccaaaagggtaacaaacaagagccattgacgaaaaaggcccaaaactttttttcaggac 5661
Query: 423 cagccctcgtgtttatatactgacgaaaattttaaaaaaatgaaaaatggaaagtgaaga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5662 cagccctcgtgtttatatactgacgaaaattttaaaaaaatgaaaaatggaaagtgaaga 5721
Query: 483 cgaaaaaaatattacaagaaattcagagtgcgatagaggacgctggaggacggatgcaag 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5722 cgaaaaaaatattacaagaaattcagagtgcgatagaggacgctggaggacggatgcaag 5781
Query: 543 aaaaaaactcataaacatgacagcgcatacaaaaacgcaaaaacccagcataataatttt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5782 aaaaaaactcataaacatgacagcgcatacaaaaacgcaaaaacccagcataataatttt 5841
Query: 603 kggaggcgttacatgagagtgcgggtaagaaaatgcttcggaaacttgacatcgttttta 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5842 gggaggcgttacatgagagtgcgggtaagaaaatgcttcggaaacttgacatcgttttta 5901
Query: 663 acgatagcagttatgatcgtcatattcacagtagaacggaacgggtcctcttgatagtgg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5902 acgatagcagttatgatcgtcatattcacagtagaacggaacgggtcctcttgatagtgg 5961
Query: 723 tggtactaggcgcaactgg 741
|||||||||||||||||||
Sbjct: 5962 tggtactaggcgcaactgg 5980
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6382
Number of Sequences: 1807
Number of extensions: 6382
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 741
length of database: 10,358,551
effective HSP length: 16
effective length of query: 725
effective length of database: 10,329,639
effective search space: 7488988275
effective search space used: 7488988275
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)